Datasets on COVID-19
COVID-19 datasets are public databases for sharing case data and medical information related to the COVID-19 pandemic.
Aggregate statistics
United States
Volunteer/non-government
Global
- Johns Hopkins Coronavirus Resource Center: Global aggregated data including cases, testing, contact tracing, and vaccine development[12]
- World Health Organization (WHO) Coronavirus Disease Dashboard: a database of confirmed cases and deaths reported globally and broken down by region.[13] This database is part of the WHO Health Data Platform.[14]
- COVID-19 Africa Open Data Project: a volunteer-run database and dashboard reporting region, country and district level case counts, deaths, healthcare worker infections, healthcare services and urgent needs.[15]
Data hubs
Topic-specific and special-interest resources
Genomics
Imaging (Radiology)
- Characteristic imaging features on chest radiographs and computed tomography (CT) of people who are symptomatic include asymmetric peripheral ground-glass opacities without pleural effusions.[24] The University of Montreal and Mila created the "COVID-19 Image Data Collection" in March which is a public data repository of chest imaging.[25][26][27] The Medical Imaging Databank in Valencian Region released a large dataset of chest imaging from Spain.[28][29] The Italian Radiological Society is compiling an international online database of imaging findings for confirmed cases.[30] Online radiology case sharing platforms such as Eurorad and Radiopaedia serve as platforms for sharing COVID-19 case data and imaging.[31][32]
References
- ^ Torpey, Holly; Caballero, M.D., Jorge A. (eds.). "COVID-19 Testing Sites Data". GISCorps/Coders Against COVID Testing Site Data. Retrieved 2020-12-14.
- ^ "Volunteer group develops a COVID-19 testing location database for the U.S." TechCrunch. Retrieved 2021-02-03.
- ^ "App of the Week: COVID-19 Testing Sites Locator". Federal Emergency Management Agency (FEMA). Retrieved 2021-02-03.
- ^ "COVID-19 Testing Sites in California". www.arcgis.com. Retrieved 2021-02-03.
- ^ "US Coronavirus Cases and Deaths". USAFacts.org. 2021-02-03. Retrieved 2021-02-03.
- ^ "Detailed Methodology and Sources: COVID-19 Data". USAFacts. Retrieved 2021-02-03.
- ^ "Coronavirus Outbreak Stats & Data". USAFacts. Retrieved 2021-02-03.
- ^ Stephens, Autumn (21 August 2020). "Tracking Star in Oakland". Diablo Magazine. Retrieved 2020-09-18.
- ^ "About Us". The COVID Tracking Project. Retrieved 2021-02-03.
- ^ Ahmad, Kashif (2021). "A Benchmark Dataset for Sentiment Analysis of Users' Reviews on COVID-19 Contact Tracing Applications". Harvard Dataverse. doi:10.7910/DVN/1RDRCM.
- ^ Ahmad, Kashif (2021). "Sentiment Analysis of Users' Reviews on COVID-19 Contact Tracing Apps with a Benchmark Dataset". arXiv:2103.01196 [cs.CL].
- ^ "Home". Johns Hopkins Coronavirus Resource Center. Retrieved 2020-09-18.
- ^ "WHO Coronavirus Disease (COVID-19) Dashboard". covid19.who.int. Retrieved 2020-09-18.
- ^ "World Health Data Platform - WHO". www.who.int. Retrieved 2020-09-18.
- ^ "COVID-19 Africa Open Data". Retrieved 16 November 2020.
- ^ "Open-Access Data and Computational Resources to Address COVID-19 | Data Science at NIH". datascience.nih.gov. Retrieved 2020-10-13.
- ^ "CORD-19". Semantic Scholar. Retrieved 2020-10-13.
- ^ "Analysis of COVID-19 publications identifies research gaps". EurekAlert!. Retrieved 2020-10-13.
- ^ "Call to Action to the Tech Community on New Machine Readable COVID-19 Dataset". whitehouse.gov. Retrieved 2020-10-13 – via National Archives.
- ^ "NLM Leverages Data, Text Mining to Sharpen COVID-19 Research Databases". governmentciomedia.com. 11 May 2020. Retrieved 2020-10-13.
- ^ "GISAID". www.gisaid.org. Retrieved 29 December 2020.
- ^ "Nexstrain SARS-CoV-2 Dashboard". nextstrain.org. Retrieved 29 December 2020.
- ^ "Nextstrain". docs.nextstrain.org. Retrieved 29 December 2020.
- ^ Li Y, Xia L (March 2020). "Coronavirus Disease 2019 (COVID-19): Role of Chest CT in Diagnosis and Management". American Journal of Roentgenology. 214 (6): 1280–1286. doi:10.2214/AJR.20.22954. PMID 32130038. S2CID 212416282.
- ^ "COVID-19 related projects". Mila. COVID-19 image data collection. Retrieved 12 July 2020.
- ^ "COVID-19 image data collection". GitHub. Retrieved 12 July 2020.
- ^ Cohen, Joseph (25 March 2020). "COVID-19 image data collection". arXiv:2003.11597 [eess.IV].
- ^ "BIMCV-COVID19, Datasets related to COVID19's pathology course". Medical Imaging Databank in Valencian Region Medical. Retrieved 12 July 2020.
- ^ de la Iglesia Vayá, Maria (1 June 2020). "BIMCV COVID-19+: a large annotated dataset of RX and CT images from COVID-19 patients". arXiv:2006.01174 [eess.IV].
- ^ "COVID-19 Database". Società Italiana di Radiologia Medica e Interventistica (in Italian). Retrieved 2020-03-11.
- ^ "Pneumothorax and pneumomediastinum: a rare complication in the evolution of COVID-19 pneumonia". Eurorad. Retrieved 12 July 2020.
- ^ Bell, Daniel; Knipe, Henry. "COVID-19 (summary)". Radiopaedia. Retrieved 12 July 2020.