Concept in probability theory
In Bayesian probability theory, if, given a likelihood function
, the posterior distribution
is in the same probability distribution family as the prior probability distribution
, the prior and posterior are then called conjugate distributions with respect to that likelihood function and the prior is called a conjugate prior for the likelihood function
.
A conjugate prior is an algebraic convenience, giving a closed-form expression for the posterior; otherwise, numerical integration may be necessary. Further, conjugate priors may give intuition by more transparently showing how a likelihood function updates a prior distribution.
The concept, as well as the term "conjugate prior", were introduced by Howard Raiffa and Robert Schlaifer in their work on Bayesian decision theory.[1] A similar concept had been discovered independently by George Alfred Barnard.[2]
Example
The form of the conjugate prior can generally be determined by inspection of the probability density or probability mass function of a distribution. For example, consider a random variable which consists of the number of successes
in
Bernoulli trials with unknown probability of success
in [0,1]. This random variable will follow the binomial distribution, with a probability mass function of the form
![{\displaystyle p(s)={n \choose s}q^{s}(1-q)^{n-s}}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
The usual conjugate prior is the beta distribution with parameters (
,
):
![{\displaystyle p(q)={q^{\alpha -1}(1-q)^{\beta -1} \over \mathrm {B} (\alpha ,\beta )}}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
where
and
are chosen to reflect any existing belief or information (
and
would give a uniform distribution) and
is the Beta function acting as a normalising constant.
In this context,
and
are called hyperparameters (parameters of the prior), to distinguish them from parameters of the underlying model (here
). A typical characteristic of conjugate priors is that the dimensionality of the hyperparameters is one greater than that of the parameters of the original distribution. If all parameters are scalar values, then there will be one more hyperparameter than parameter; but this also applies to vector-valued and matrix-valued parameters. (See the general article on the exponential family, and also consider the Wishart distribution, conjugate prior of the covariance matrix of a multivariate normal distribution, for an example where a large dimensionality is involved.)
If we sample this random variable and get
successes and
failures, then we have
![{\displaystyle {\begin{aligned}P(s,f\mid q=x)&={s+f \choose s}x^{s}(1-x)^{f},\\P(q=x)&={x^{\alpha -1}(1-x)^{\beta -1} \over \mathrm {B} (\alpha ,\beta )},\\P(q=x\mid s,f)&={\frac {P(s,f\mid x)P(x)}{\int P(s,f\mid y)P(y)dy}}\\&={{{s+f \choose s}x^{s+\alpha -1}(1-x)^{f+\beta -1}/\mathrm {B} (\alpha ,\beta )} \over \int _{y=0}^{1}\left({s+f \choose s}y^{s+\alpha -1}(1-y)^{f+\beta -1}/\mathrm {B} (\alpha ,\beta )\right)dy}\\&={x^{s+\alpha -1}(1-x)^{f+\beta -1} \over \mathrm {B} (s+\alpha ,f+\beta )},\end{aligned}}}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
which is another Beta distribution with parameters
. This posterior distribution could then be used as the prior for more samples, with the hyperparameters simply adding each extra piece of information as it comes.
Interpretations
Pseudo-observations
It is often useful to think of the hyperparameters of a conjugate prior distribution corresponding to having observed a certain number of pseudo-observations with properties specified by the parameters. For example, the values
and
of a beta distribution can be thought of as corresponding to
successes and
failures if the posterior mode is used to choose an optimal parameter setting, or
successes and
failures if the posterior mean is used to choose an optimal parameter setting. In general, for nearly all conjugate prior distributions, the hyperparameters can be interpreted in terms of pseudo-observations. This can help provide intuition behind the often messy update equations and help choose reasonable hyperparameters for a prior.
Dynamical system
One can think of conditioning on conjugate priors as defining a kind of (discrete time) dynamical system: from a given set of hyperparameters, incoming data updates these hyperparameters, so one can see the change in hyperparameters as a kind of "time evolution" of the system, corresponding to "learning". Starting at different points yields different flows over time. This is again analogous with the dynamical system defined by a linear operator, but note that since different samples lead to different inferences, this is not simply dependent on time but rather on data over time. For related approaches, see Recursive Bayesian estimation and Data assimilation.
Practical example
Suppose a rental car service operates in your city. Drivers can drop off and pick up cars anywhere inside the city limits. You can find and rent cars using an app.
Suppose you wish to find the probability that you can find a rental car within a short distance of your home address at any time of day.
Over three days you look at the app and find the following number of cars within a short distance of your home address: ![{\displaystyle \mathbf {x} =[3,4,1]}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
Suppose we assume the data comes from a Poisson distribution. In that case, we can compute the maximum likelihood estimate of the parameters of the model, which is
Using this maximum likelihood estimate, we can compute the probability that there will be at least one car available on a given day: ![{\textstyle p(x>0|\lambda \approx 2.67)=1-p(x=0|\lambda \approx 2.67)=1-{\frac {2.67^{0}e^{-2.67}}{0!}}\approx 0.93}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
This is the Poisson distribution that is the most likely to have generated the observed data
. But the data could also have come from another Poisson distribution, e.g., one with
, or
, etc. In fact, there is an infinite number of Poisson distributions that could have generated the observed data. With relatively few data points, we should be quite uncertain about which exact Poisson distribution generated this data. Intuitively we should instead take a weighted average of the probability of
for each of those Poisson distributions, weighted by how likely they each are, given the data we've observed
.
Generally, this quantity is known as the posterior predictive distribution
where
is a new data point,
is the observed data and
are the parameters of the model. Using Bayes' theorem we can expand
therefore
Generally, this integral is hard to compute. However, if you choose a conjugate prior distribution
, a closed-form expression can be derived. This is the posterior predictive column in the tables below.
Returning to our example, if we pick the Gamma distribution as our prior distribution over the rate of the Poisson distributions, then the posterior predictive is the negative binomial distribution, as can be seen from the table below. The Gamma distribution is parameterized by two hyperparameters
, which we have to choose. By looking at plots of the gamma distribution, we pick
, which seems to be a reasonable prior for the average number of cars. The choice of prior hyperparameters is inherently subjective and based on prior knowledge.
Given the prior hyperparameters
and
we can compute the posterior hyperparameters
and ![{\textstyle \beta '=\beta +n=2+3=5}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
Given the posterior hyperparameters, we can finally compute the posterior predictive of ![{\textstyle p(x>0|\mathbf {x} )=1-p(x=0|\mathbf {x} )=1-NB\left(0\,|\,10,{\frac {1}{1+5}}\right)\approx 0.84}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
This much more conservative estimate reflects the uncertainty in the model parameters, which the posterior predictive takes into account.
Table of conjugate distributions
Let n denote the number of observations. In all cases below, the data is assumed to consist of n points
(which will be random vectors in the multivariate cases).
If the likelihood function belongs to the exponential family, then a conjugate prior exists, often also in the exponential family; see Exponential family: Conjugate distributions.
When the likelihood function is a discrete distribution
When likelihood function is a continuous distribution
See also
Notes
- ^ a b Denoted by the same symbols as the prior hyperparameters with primes added ('). For instance
is denoted ![{\displaystyle \alpha '}](data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)
- ^ This is the posterior predictive distribution of a new data point
given the observed data points, with the parameters marginalized out. Variables with primes indicate the posterior values of the parameters. - ^ a b c d e f g The exact interpretation of the parameters of a beta distribution in terms of number of successes and failures depends on what function is used to extract a point estimate from the distribution. The mean of a beta distribution is
which corresponds to
successes and
failures, while the mode is
which corresponds to
successes and
failures. Bayesians generally prefer to use the posterior mean rather than the posterior mode as a point estimate, justified by a quadratic loss function, and the use of
and
is more convenient mathematically, while the use of
and
has the advantage that a uniform
prior corresponds to 0 successes and 0 failures. The same issues apply to the Dirichlet distribution. - ^ a b c β is rate or inverse scale. In parameterization of gamma distribution,θ = 1/β and k = α.
- ^ This is the posterior predictive distribution of a new data point
given the observed data points, with the parameters marginalized out. Variables with primes indicate the posterior values of the parameters.
and
refer to the normal distribution and Student's t-distribution, respectively, or to the multivariate normal distribution and multivariate t-distribution in the multivariate cases. - ^ In terms of the inverse gamma,
is a scale parameter - ^ A different conjugate prior for unknown mean and variance, but with a fixed, linear relationship between them, is found in the normal variance-mean mixture, with the generalized inverse Gaussian as conjugate mixing distribution.
- ^
is a compound gamma distribution;
here is a generalized beta prime distribution.
References
- ^ Howard Raiffa and Robert Schlaifer. Applied Statistical Decision Theory. Division of Research, Graduate School of Business Administration, Harvard University, 1961.
- ^ Jeff Miller et al. Earliest Known Uses of Some of the Words of Mathematics, "conjugate prior distributions". Electronic document, revision of November 13, 2005, retrieved December 2, 2005.
- ^ a b c Fink, Daniel (1997). "A Compendium of Conjugate Priors" (PDF). CiteSeerX 10.1.1.157.5540. Archived from the original (PDF) on May 29, 2009.
- ^ a b c d e f g h i j k l m Murphy, Kevin P. (2007), Conjugate Bayesian analysis of the Gaussian distribution (PDF)
- ^ Liu, Han; Wasserman, Larry (2014). Statistical Machine Learning (PDF). p. 314.